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structure nameCRYO-EM STRUCTURE OF YEAST MITOCHONDRIAL RNA POLYMERASE TRANSCRIPTION INITIATION COMPLEX WITH 6-MER RNA, PPPGPGPAPAPAPU (IC6)
experimentNMR
structural superfamilyDNA/RNA polymerases;
sequence familyDNAdependent RNA polymerase;
multimeric complexes6ymv_AB 6ymw_AB
reference complex6ymv_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNTRRYNSKLRSCRYQTYVTYVQQFRPH

Estimated binding specificities ?

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# IC=7.887 IC/col=0.282 n_of_columns=28 specificity:   
A |  24  24  24  24  24  21  24   0  96  18  21  22  24  24   0  24  20  96  96   3  52  24  24  24  24  24  24  24
C |  24  24  24  24  24  21  24  96   0  18  21  25  24  24   0  24  34   0   0   5  14  24  24  24  24  24  24  24
G |  24  24  24  24  24  21  24   0   0  18  23  22  24  24  96  24  20   0   0   3  14  24  24  24  24  24  24  24
T |  24  24  24  24  24  33  24   0   0  42  31  27  24  24   0  24  22   0   0  85  16  24  24  24  24  24  24  24
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updated Tue Dec 19 02:16:34 2023