Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF SSX1 BOUND TO THE UNMODIFIED NUCLEOSOME AT A RESOLUTION OF 3.02 ANGSTROM
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes6fq5_ABCDEFGH 8hr1_ABCDEFGH
redundant complexes6fq5
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  RAAANA------                       +----------1jfi_B    
                           +---------7 
  ------RA----             !         !       +--7xsx_a    
                           !         +-------5 
  --------RA--             !                 +--6g0l_D    
                           !  
  ------RG----             !                    +7e9c_G    
                           !     +--------------1 
  ------RG----          +-10     !              +8jla_C    
                        !  !     ! 
  ------RT----          !  !  +--8                +8u14_G    
                        !  !  !  !              +-2 
  ------RA----          !  !  !  !   +----------4 +1zla_C    
                        !  !  !  !   !          ! 
  ------RG----          !  +--9  +---6          +8ox0_C    
                     +-11     !      ! 
  ------RA--RA       !  !     !      +----------6a5l_g    
                     !  !     ! 
  ------RG----       !  !     !                 +8txv_G    
                   -12  !     +-----------------3 
  ------RG----       !  !                       +5x0y_G    
                     !  !  
  --LC--RT----       !  +---------------------8hr1_E    
                     !  
  ------RT----       +-----------------------8grq_A    
                   

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updated Mon Aug 4 01:11:40 2025