Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYSTAL STRUCTURE OF CENP-C IN COMPLEX WITH THE NUCLEOSOME CORE PARTICLE
referenceScience 340 1110 2013 Escherichia coli
experimentX-ray (resolution=3.50, R-factor=0.238)
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes4x23_ABCDEFG 4x23_KLMNOPQ
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  --RA--          +---------------------------6g0l_D    
                  !  
  RA----          !                             +1zla_C    
                  !       +---------------------4 
  RG----          !       !                     +8jla_C    
                  !     +-7 
  RT----          !     ! !                      +8u14_G    
               +-10     ! +----------------------1 
  RG----       !  !     !                        +8ox0_C    
               !  !   +-8 
  RC----       !  !   ! !                  +---6qld_f    
               !  !   ! !          +-------5 
  RA----       !  !   ! !          !       !   +7xsx_a    
               !  !   ! +----------6       +---3 
  RT----     -11  +---9            !           +8grq_A    
               !      !            ! 
  RT----       !      !            +-----------8hr1_E    
               !      ! 
  RA--RA       !      !                       +6a5l_g    
               !      +-----------------------2 
  RG----       !                              +8txv_G    
               !  
  RG----       +-----------------------------5x0y_G

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updated Sun Aug 3 08:36:51 2025