interface graph thumbnail
legend  pdf

structure nameTHE TRANSCRIPTIONAL REGULATOR PRFA FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH GLUTATHIONE AND A 30-BP OPERATOR PRFA-BOX MOTIF
(Listeriolysin positive regulatory factor A)
referenceSauer-Eriksson et al. 'Proc. 113 14733 2016
sourceListeria monocytogenes
experimentX-ray (resolution=2.90, R-factor=0.249)
structural superfamilycAMP-binding domain-like;"Winged helix" DNA-binding domain;
multimeric complexes5lej_AB 5lek_AB 5lrs_AB 5x6d_GH 5x6d_MN 5x6e_EF 5x6e_MN 6qwf_AB 6qwh_AB 6qwk_AB 6qwm_AB
reference complex5lej_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHSASR

Estimated binding specificities ?

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# IC=5.807 IC/col=0.968 n_of_columns=6 specificity:   
A |   0   0   0   0  57  54
C |   0   0   0   0  13  13
G |   0  96   0   0  13  13
T |  96   0  96  96  13  16
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updated Thu Sep 12 21:45:40 2024