| structure name | THE TRANSCRIPTIONAL REGULATOR PRFA-A94V MUTANT FROM LISTERIA MONOCYTOGENES IN COMPLEX WITH A 30-BP OPERATOR PRFA-BOX MOTIF (Listeriolysin positive regulatory factor A) |
| reference | Sauer-Eriksson et al. J.Bacteriol. 202 ? 2020 |
| source | Listeria monocytogenes |
| experiment | X-ray (resolution=2.70, R-factor=0.227) |
| structural superfamily | cAMP-binding domain-like;"Winged helix" DNA-binding domain; |
| multimeric complexes | 5lej_AB 5lek_AB 5lrs_AB 5x6d_GH 5x6d_MN 5x6e_EF 5x6e_MN 6qwf_AB 6qwh_AB 6qwk_AB 6qwm_AB |
| redundant complexes | 6qwh 6qwk 6qwm 5lej 5lek 5lrs 5x6e 5x6d |
| reference complex | 5lej_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | HSASR |
Estimated binding specificities ?
| contact |  |
A | 13 16 96 96 0 96 C | 13 13 0 0 96 0 G | 13 13 0 0 0 0 T | 57 54 0 0 0 0scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: PRFA | ||
| TTAACATTTGTTAA | PubMed | 6qwf_B(2.65e-04), 5lej_AB(1.89e-10), 5lek_AB(2.34e-08), ... (total=19) |
| TTAACAGCGTTTGTTAA | PubMed | 6qwf_B(5.02e-04), 5lej_AB(3.76e-03), 5x6d_MN(1.35e-03), ... (total=13) |
| TTAACANNTGTTAA | PubMed | 6qwf_B(2.65e-04), 5lej_AB(1.89e-10), 5lek_AB(2.34e-08), ... (total=19) |
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updated Fri Sep 13 01:39:56 2024