structure name | POLYMERASE DOMAIN OF POLYMERASE-THETA (DNA POLYMERASE THETA) |
reference | Pomerantz et al. 'Sci 7 ? 2021 |
source | HOMO SAPIENS |
experiment | X-ray (resolution=3.29, R-factor=0.253) |
structural superfamily | DNA/RNA polymerases;Ribonuclease H-like; |
sequence family | DNA polymerase family A; |
reference complex | 8gd7_A |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | KNQH |
Estimated binding specificities ?
contact |
A | 67 0 9 9 C | 9 0 9 9 G | 11 0 9 69 T | 9 96 69 9scan! |
Dendrogram of similar interfaces ?
matrix format--------------------------KA----------------NT--------------------------------------------QG----HT L +-6xbu_A +-----------------2 ----------------------NA--KG----------RC----NT--QC----------------------------NG--YGATRT--QG----HC ! +-4x0p_B ! --------------------------RC----------RA--NGNG----YG--YT--SCYC--------------------------NTQT------ L ! +-6vdd_A ! +-1 ------------------------KT--YG--------RG--NGNG----YG--YAIGSCYC----NG--RC--------FG--------QA----HG ! +--3 +-4yfu_D +-------8 ! ! NGKGYGMG--RC--EG--------------SGHGVC-------------------------------------------------------------- ! ! +--5 +-1kln_A ! ! ! ! ----------------AAVAAA--KC------------RT--NGNC--TC----YCMCSAHARAQAEA--------------------NGQG------ ! ! ! ! +--6fbc_A ! ! +--------6 +-4 ------------------------------------------NANC----FC--YG------RG----------------------RGNGQC------ L +-9 ! ! ! +--1tau_A ! ! +--7 ! ----------------------KT--------------RG------EGKGYGACYCAC----RC------------------QTATRTNGQG----HC L ! ! ! +-------4xvk_A ! ! ! --------------------------------------RT--NGQG--------YA------------------------------------QA---- +-10 ! +----------------1x9m_A ! ! ! ------------------------------------RCRCYC----------TTYT--------------------------------------HT-- ! ! +---------------------------1msw_D -11 ! --------------------------------------------------------------------SGRGPTSGRG-------------------- L ! +----------------------------7bhy_A ! NC--FC--RC--YA------------------------------------------------------------------------------------ +-----------------------------4fzx_D |
home
updated Fri Sep 13 03:12:30 2024