7k6p_D : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	ACTIVE STATE DOT1 BOUND TO THE UNACETYLATED H4 NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7k6p_ABCDEFGH 7k6q_ABCDEFGHK
redundant complexes	7k6q
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7k6p_D interface=2, tRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtcytsa

  
  ------RA--       +-----------------------------6g0l_D    
                   !  
  RT--------       !                         +----9fgq_D    
                   !            +------------2 
  ----RG----       !            !            +----5x0y_G    
                   !          +-6 
  ----RA----     -10          ! !                 +1zla_C    
                   !          ! !  +--------------1 
  ----RG----       !  +-------7 +--5              +8ox0_C    
                   !  !       !    ! 
  ----RA--RA       !  !       !    +--------------6a5l_g    
                   !  !       ! 
  ----RG----       +--9       +------------------8jla_C    
                      ! 
  ----RT----          !              +-----------8u14_G    
                      !     +--------3 
  --LCRT----          !     !        +-----------8hr1_E    
                      +-----8 
  ----RG----                !        +-----------8txv_G    
                            +--------4 
  ----RT----                         +-----------8grq_A

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updated Wed Dec 18 09:26:49 2024