Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCENP-A NUCLEOSOME IN COMPLEX WITH CENP-C
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4; Histonelike transcription factor CBF/;
multimeric complexes7on1_abcdefgh
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  --RA--RA       +-----------------------------6a5l_g    
                 !  
  --RT----       !                              +8u14_G    
                 !         +--------------------1 
  --RG----       !         !                    +8ox0_C    
                 !         !  
  --RT----     -15      +-13                     +8smw_G    
                 !      !  !                   +-2 
  --RA----       !      !  !          +--------6 +1zla_C    
                 !      !  !          !        ! 
  --RG----       !      !  +---------10        +8jla_C    
                 !      !             !  
  --RG----       !      !             !         +8txv_G    
                 +-----14             +---------3 
  --RG----              !                       +5x0y_G    
                        !  
  --RG--RG              !     +----------------8kcb_A    
                        !     !  
  --RC----              !     !            +---6qld_f    
                        !     !      +-----8 
  ----RA--              +----12      !     +---6g0l_D    
                              !  +---9 
  LC------                    !  !   !        +8bvw_e    
                              !  !   +--------7 
  --RT----                    +-11            +8hr1_E    
                                 !  
  --RA----                       !               +7xsx_a    
                                 !             +-4 
  LARG----                       +-------------5 +7unc_a    
                                               ! 
  --RT----                                     +8grq_A    
               

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updated Wed Dec 18 10:08:04 2024