7yrd_C : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	HISTONE METHYLTRANSFERASE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7yrd_C interface=31, kavsrsqraglqfpvgrihrhlksrttshgRvgataavysaaileyltaevlelagnaskdlkvkritprhlqlairgdeeldslikatiagggviphihksli

  
  ------RA--                                      +--6t7a_C    
                                    +-------------2 
  ------RA--                    +---4             +--7xsx_a    
                                !   ! 
  ------RT--           +--------6   +----------------7lyb_G    
                       !        ! 
  ------RG--         +-8        +--------------------7e9c_G    
                     ! ! 
  --IT------       +-9 +-----------------------------6r8y_H    
                   ! ! 
  ------RG--       ! +-----------------------------5t5k_E    
                   !  
  --------RG       !                            +8eue_E    
                 -10              +-------------1 
  ------RG--       !         +----3             +7k6p_A    
                   !         !    ! 
  --LT--RC--       !    +----5    +--------------5xm1_A    
                   !    !    ! 
  ------RT--       +----7    +-------------------7wlr_E    
                        ! 
  RAAANA----            +------------------------1jfi_B

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updated Wed Dec 20 00:08:04 2023