8euj_f : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CLASS2 OF THE INO80-NUCLEOSOME COMPLEX
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	8euj_HMOabfhk
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8euj_f interface=1,3,26,44,77, RyRpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakRvtimpkdiqlarrirgera

  
  ------LT------RG                                    +8eue_E    
                                              +-------2 
  YT----------RG--                            !       +7k6p_A    
                                        +-----4 
  ------LT----RC--                      !     !       +5xm1_A    
                                        !     +-------1 
  --RG------------              +-------7             +6pww_K    
                                !       ! 
  YA----------RT--              !       !        +----7wlr_E    
                                !       +--------3 
  ------------RA--            +-8                +----7xsx_a    
                              ! ! 
  ----RA--AANA----            ! !             +-------1jfi_B    
                              ! !         +---5 
  --------IT------          +-9 +---------6   +-------6r8y_H    
                            ! !           ! 
  ------------RT--          ! !           +-----------7lyb_G    
                         +-10 ! 
  ------------RA--       !  ! +-----------------------6t7a_C    
                       -11  !  
  ------------RG--       !  +-----------------------7e9c_G    
                         !  
  ------------RG--       +-------------------------5t5k_E

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updated Wed Dec 20 02:28:48 2023