| structure name | CRYSTAL STRUCTURE OF THE ZALPHA Z-DNA COMPLEX (PROTEIN DOUBLE-STRANDED RNA SPECIFIC ADENOSINE DEAMINASE ADAR1) |
| reference | Schwartz et al. Science 284 1841 1999 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.10, R-factor=0.227) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Adenosine deaminase zalpha domain; |
| multimeric complexes | 2acj_BCD 3f23_AB 3irq_AD 3irr_AB 3irr_CD 5zu1_BC 5zuo_BCD 5zup_BCD |
| redundant complexes | 2acj_C 3f21_A 3f22_A 3f23_B 3irq_D 3irr_C 5zu1_B 5zuo_B 5zup_D |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format------------------TTHT----KG------------------RC---- L +-----------------------------7b0c_A +-7 --------LT------RTSGTG--QTRG------------------------ L +-8 +-----------------------------2xro_E ! ! ----------SGQG--YCNC-------------------------------- +-9 +-----------------------------2ve9_C ! ! ----------------RC------RC-------------------------- +-10 +-----------------------------6wfq_C ! ! ----------------RCTT----TTHT--LA-------------------- L ! +-----------------------------7e1b_B ! --------------------------------YG------------------ ! +2heo_D ! +---------------1 ------------------NT----TA----------------------RT-- L ! +----2 +5zux_A +-11 ! ! --RGRTKG--------------------------------------YG---- L ! ! +-3 +---------------6lui_A ! ! ! ! ----------TC--STKTPTTT--FT------------------------RT ! ! +-4 +--------------------4ass_H ! ! ! ! ------------------NTVC--ECSTYT--STYC----------RA---- L +-12 ! +-5 +----------------------5ed4_A ! ! ! ! ! KC--------------MGSGTT--TTYC------------------------ L ! ! +---6 +------------------------5f7q_C ! ! ! --------------------RG--YC-------------------------- L +-13 ! +-------------------------1cf7_B ! ! ! --------------TT--RGRT----------------------------KT L ! ! +-----------------------------2v1u_A +-14 ! --------------------------------------------------RT ! ! +-----------------------------3gfi_A +-15 ! ------------------------NAST--RGHTNT--STLT---------- L ! ! +-----------------------------7fj2_B +-16 ! ------------------------NAST--RGHT----ST------------ L ! ! +-----------------------------3g73_A +-17 ! --------------------------NT------NA------RG-------- L ! ! +-----------------------------1b8i_B +-18 ! --------------STRGECTA--NGKG------------------------ L ! ! +-----------------------------3mzh_A +-19 ! ------------------QT--NAST--RGHTNT--STLA------------ L ! ! +-----------------------------2hdc_A +-20 ! --------------------------NC----ITNA----RGRG-------- L ! ! +-----------------------------6fqq_E +-21 ! --------------------------NT------NA------ITRG------ ! ! +-----------------------------5zjt_B +-22 ! --------------------------NT------NA----IARG-------- L ! ! +-----------------------------1b72_B -23 ! --------------------------IT----QCNA----ACRG-------- L ! +-----------------------------6a8r_A ! ------------------TGQA------SARG-------------------- L +-----------------------------2p5l_D |
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updated Fri Sep 13 15:56:38 2024