structure name | CRYSTAL STRUCTURE OF NFKB, IRF7, IRF3 BOUND TO THE INTERFERON-B ENHANCER (TRANSCRIPTION FACTOR P65INTERFERON REGULATORY FACTOR...) |
reference | 'Cell(Cambridge,Mass.)' 129 1111 2007 |
source | HOMO SAPIENS |
experiment | X-ray (resolution=2.80, R-factor=?) |
structural superfamily | p53-like transcription factors;"Winged helix" DNA-binding domain;E set domains; |
sequence family | Rel homology domain RHD; Interferon regulatory factor transcription f; IPT/TIG domain; |
multimeric complexes | 2o61_AB |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | RRYCERRKHTNRCRSHLRNRSR |
Estimated binding specificities ?
readout + contact |
A | 2 24 24 0 10 87 0 90 24 24 5 2 87 96 24 24 24 24 24 24 24 24 24 2 0 0 0 0 5 C | 87 24 24 0 8 2 0 2 24 24 2 2 2 0 24 24 24 24 24 24 24 24 24 2 0 96 96 0 85 G | 5 24 24 96 70 2 96 2 24 24 2 10 5 0 24 24 24 24 24 24 24 24 24 5 0 0 0 0 2 T | 2 24 24 0 8 5 0 2 24 24 87 82 2 0 24 24 24 24 24 24 24 24 24 87 96 0 0 96 4scan! |
Dendrogram of similar interfaces ?
matrix formatRGRGYTCTECRT---------------------- L +-----------------------------1gji_A ! --------------ECKT--RGAT--RGHT--RA L +-3 +---4mhg_A ! ! +-1 ----------------KT--RG----RGYT---- L ! +------------------------2 +---4bqa_A +-4 ! ----------------KT--RG----RGYA---- L ! ! +----4l18_B --5 ! ------------------NAST--RGHT--ST-- L ! +-----------------------------2uzk_A ! ------------ST----NAST--RTHT--ST-- L +-----------------------------3l2c_A |
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updated Tue Dec 19 06:45:10 2023