| structure name | XRAY STRUCTURE OF KOPS BOUND GAMMA DOMAIN OF FTSK (P. AERUGINOSA) (DNA TRANSLOCASE FTSK) |
| reference | Sherratt et al. Mol.Cell 31 498 2008 |
| source | PSEUDOMONAS AERUGINOSA |
| experiment | X-ray (resolution=1.90, R-factor=0.199) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Ftsk gamma domain; |
| multimeric complexes | 2ve9_AF 2ve9_BC 2ve9_DE |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: KOPS | ||
| GGGNAGGG | PubMed | 2ve9_C(2.03e-03), 2ve9_BC(1.79e-03), 2ve9_DE(1.79e-03) |
Dendrogram of similar interfaces ?
matrix format------RGSTRT--STHG------------------RA---- L +3zpl_B +-----------------------1 ----DCLT--AG--TTRG------RG----------RA---- L +----4 +5h3r_A ! ! ----ITRGECSC--SGKG------------------------ L ! +-----------------------5i2d_R +-5 ----------------NAST--HT--STLT------------ L ! ! +------7cby_C ! ! +--2 --------------NAST--RTHT--ST-------------- L +-6 +------------------3 +------3l2c_A ! ! ! LA--NTHGTTET--YTRG------------------------ L ! ! +---------1f4k_B +-7 ! TT------KATT--QTTG----LTRT----KA------FTYT L ! ! +-----------------------------2p7c_B +-8 ! --VTSARGTA----RT-------------------------- L ! ! +-----------------------------6za3_B +-9 ! ----------------------YG------------------ ! ! +-----------------------------3eyi_B +-10 ! ------PTPG--TT--------------------HG------ L ! ! +-----------------------------7d98_Q -11 ! ----EGRTRGRG--YT-------------------------- L ! +-----------------------------4yo2_A ! ------------VT----ST------------WT-------- L +-----------------------------6lxn_A |
home
updated Fri Sep 13 16:42:43 2024