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legend  pdf

structure nameSTRUCTURE OF NF-KB P65-P50 HETERODIMER BOUND TO PRDII ELEMENT OF B- INTERFERON PROMOTER
(NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT)
referenceEscalante et al. Structure 10 383 2002
sourceMUS MUSCULUS
experimentX-ray (resolution=2.80, R-factor=0.233)
structural superfamilyp53-like transcription factors;E set domains;
sequence familyRel homology domain RHD; IPT/TIG domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRYCESHK

Estimated binding specificities ?

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# IC=4.853 IC/col=0.971 n_of_columns=5 specificity:   
A |  19  19   0   0   0
C |   0  20  96  96  96
G |   1  19   0   0   0
T |  76  38   0   0   0
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updated Mon Dec 16 19:41:01 2024