| structure name | CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I TETRAMER IN COMPLEX WITH ITS NATURAL 35 BASE-PAIR OPERATOR (Regulatory protein) |
| reference | McGeehan et al. 'Nucleic 36 4778 2008 |
| source | Enterobacter sp. |
| experiment | X-ray (resolution=2.80, R-factor=0.209) |
| structural superfamily | lambda repressor-like DNA-binding domains; |
| sequence family | Helixturnhelix; |
| multimeric complexes | 3clc_ABCD 3s8q_AB 3ufd_AB 4ivz_AF 4iwr_AB 4iwr_EF 4x4b_ABCD 4x4c_ABCD 4x4d_ABCD 4x4e_ABCD 4x4f_ABCD 4x4g_ABCD 4x4h_ABCD 4x4i_ABCD |
| reference complex | 3s8q_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | QEDTYSRR |
Estimated binding specificities ?
| contact |  |
A | 9 0 0 0 67 9 C | 9 0 0 0 11 9 G | 9 96 0 96 9 9 T | 69 0 96 0 9 69scan! |
Dendrogram of similar interfaces ?
matrix formatQTEGDC--TAYTST--RG--RA-------- L +----3clc_C +------2 QT--STNTVTATSTQTRTETTT-------- L ! ! +2r1j_L +----4 +---1 --TT--QAQCSTQCLT----------RA-- L ! ! +3cro_L +--5 ! ----TTQAQTSTEAQT-------------- L ! ! +-----------1rpe_R +---6 ! --ET--QASG----------NG-------- L ! ! +----------------1lmb_4 ! ! QTET--QTSG----------NA-------- L ! +-------------------3bdn_A +---8 --STKCQAAT--SA---------------- L ! ! +------3dnv_B ! ! +------------3 ----TTQA--LTSAET-------------- L --9 +---7 +------2o4a_A ! ! ----------------------NGNT--RG L ! +-------------------1j3e_A ! QA--STQAST--SA---------------- L +---------------------------3d1n_I |
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updated Thu Sep 12 17:00:57 2024