| structure name | CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN C.ESP1396I TETRAMER IN COMPLEX WITH ITS NATURAL 35 BASE-PAIR OPERATOR (Regulatory protein) |
| reference | McGeehan et al. 'Nucleic 36 4778 2008 |
| source | Enterobacter sp. |
| experiment | X-ray (resolution=2.80, R-factor=0.209) |
| structural superfamily | lambda repressor-like DNA-binding domains; |
| sequence family | Helixturnhelix; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | QEDTYSRR |
Estimated binding specificities ?
| contact |  |
A | 67 9 0 96 0 69 C | 9 11 96 0 96 9 G | 11 9 0 0 0 9 T | 9 67 0 0 0 9scan! |
Dendrogram of similar interfaces ?
matrix formatQTEGDC--TAYTST--RG--RA-------- L +----3clc_C +------2 QT--STNTVTATSTQTRTETTT-------- L ! ! +2r1j_L +----4 +---1 --TT--QAQCSTQCLT----------RA-- L ! ! +3cro_L +--5 ! ----TTQAQTSTEAQT-------------- L ! ! +-----------1rpe_R +---6 ! --ET--QASG----------NG-------- L ! ! +----------------1lmb_4 ! ! QTET--QTSG----------NA-------- L ! +-------------------3bdn_A +---8 --STKCQAAT--SA---------------- L ! ! +------3dnv_B ! ! +------------3 ----TTQA--LTSAET-------------- L --9 +---7 +------2o4a_A ! ! ----------------------NGNT--RG L ! +-------------------1j3e_A ! QA--STQAST--SA---------------- L +---------------------------3d1n_I |
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updated Mon Dec 16 20:38:53 2024