interface graph thumbnail
legend  pdf

structure nameC.ESP1396I BOUND TO ITS HIGHEST AFFINITY OPERATOR SITE OM
(Regulatory protein)
referenceMcGeehan et al. 'Nucleic 40 10532 2012
sourceEnterobacter sp. RFL1396
experimentX-ray (resolution=2.80, R-factor=0.207)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureDRTYSR

Estimated binding specificities ?

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# IC=6.633 IC/col=0.948 n_of_columns=7 specificity:   
A |   0  11   0   9  96   0  67
C |   0   9  96  11   0  96   9
G |  96   9   0  67   0   0   9
T |   0  67   0   9   0   0  11
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updated Mon Dec 16 22:19:37 2024