interface graph thumbnail
legend  pdf

structure nameC.ESP1396I BOUND TO A 25 BASE PAIR OPERATOR SITE
(Regulatory protein)
referenceMartin et al.
sourceEnterobacter sp.
experimentX-ray (resolution=2.40, R-factor=0.200)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQEDRTYSRR

Estimated binding specificities ?

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# IC=5.335 IC/col=0.889 n_of_columns=6 specificity:   
A |   0   9   9  57   0  96
C |   0   9  21   9  96   0
G |  96   0   9   9   0   0
T |   0  78  57  21   0   0
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updated Mon Dec 16 23:36:02 2024