interface graph thumbnail
legend  pdf

structure nameRADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 2.1 MGY
(Regulatory protein)
referenceMcGeehan et al.
sourceEnterobacter sp. RFL1396
experimentX-ray (resolution=2.80, R-factor=0.207)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEDRTYSRR

Estimated binding specificities ?

contactlogo
# IC=6.409 IC/col=0.916 n_of_columns=7 specificity:   
A |  17   8   0  54  96   0  96
C |  19  10  96   8   0  96   0
G |  43   0   0  17   0   0   0
T |  17  78   0  17   0   0   0
scan!

home
updated Tue Dec 17 00:24:43 2024