interface graph thumbnail
legend  pdf

structure nameRADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 10.3 MGY
(Regulatory protein)
referenceMcGeehan et al.
sourceEnterobacter sp. RFL1396
experimentX-ray (resolution=2.80, R-factor=0.237)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEDRTSR

Estimated binding specificities ?

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# IC=6.711 IC/col=0.959 n_of_columns=7 specificity:   
A |  67   0   0   9  69   0  96
C |  11   0   0  69   9  96   0
G |   9  96   0   9   9   0   0
T |   9   0  96   9   9   0   0
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updated Tue Dec 17 00:25:10 2024