interface graph thumbnail
legend  pdf

structure nameRADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 14.4 MGY
(Regulatory protein)
referenceMcGeehan et al.
sourceEnterobacter sp. RFL1396
experimentX-ray (resolution=2.80, R-factor=0.242)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEDRTYSRR

Estimated binding specificities ?

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# IC=6.387 IC/col=0.912 n_of_columns=7 specificity:   
A |  17  10   0  52  96   0  96
C |  19   8  96   8   0  96   0
G |  43   0   0  19   0   0   0
T |  17  78   0  17   0   0   0
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updated Tue Dec 17 00:25:20 2024