interface graph thumbnail
legend  pdf

structure nameRADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 44.6 MGY
(Regulatory protein)
referenceMcGeehan et al.
sourceEnterobacter sp. RFL1396
experimentX-ray (resolution=2.80, R-factor=0.266)
structural superfamilylambda repressor-like DNA-binding domains;
sequence familyHelixturnhelix;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQDRTYSRR

Estimated binding specificities ?

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# IC=3.101 IC/col=0.775 n_of_columns=4 specificity:   
A |  13   0  13   0
C |  16   0  13   0
G |  13  96  16  96
T |  54   0  54   0
scan!

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updated Tue Dec 17 00:26:02 2024