8tkl_A : 3D-footprint complex

structure name	MURINE NF-KAPPAB P50 REL HOMOLOGY REGION HOMODIMER IN COMPLEX WITH A TEST 16-MER KAPPAB-LIKE DNA (Nuclear factor NF-kappa-B p50 subunit)
reference	Rogers et al. Biomolecules 13 ? 2023
source	Mus musculus
experiment	X-ray (resolution=3.00, R-factor=0.228)
structural superfamily	p53-like transcription factors;E set domains;
sequence family	Rel homology domain RHD; IPT/TIG domain;
multimeric complexes	1le5_AB 1le5_EF 1le9_AB 1le9_EF 1lei_AB 1nfk_AB 1vkx_AB 2i9t_AB 2o61_AB 3gut_ABD 3gut_CF 3gut_EGH 8tkl_AB 8tkm_AB
reference complex	1nfk_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8tkl_A interface=16,18,19,21,22,26,203,234,267, gpylqileqpkqrgfRfRYvCEgpsHgglpgasseknkksypqvkicnyvgpakvivqlvtngknihlhahslvgkhcedgvctvtagpkdmvvgfanlgilhvtkkkvfetlearmteacirgynpgllvhsdlaylqaegggdrqltdrekeiirqaavqqtkemdlsvvrlmftaflpdstgsftrrlepvvsdaiydsKapnasnlkivrmdrtagcvtggeeiyllcdKvqkddiqirfyeeeenggvwegfgdfsptdvhRqfaivfktpkykdvnitkpasvfvqlrrksdletsepkpflyype
interface signature	RRYCEHKKR

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# IC=3.961 IC/col=0.792 n_of_columns=5

A |   4   0   4   4  49
C |   4   0   4   7  15
G |  84  96  84  81  15
T |   4   0   4   4  17

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updated Fri Sep 13 13:48:50 2024