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legend  pdf

structure nameMURINE NF-KAPPAB P50 REL HOMOLOGY REGION HOMODIMER IN COMPLEX WITH 10- MER KAPPAB DNA FROM HUMAN NEUTROPHIL GELATINASE-ASSOCIATED LIPOCALIN (NGAL) PROMOTER
(Nuclear factor NF-kappa-B p50 subunit)
referenceRogers et al. Biomolecules 13 ? 2023
sourceMus musculus
experimentX-ray (resolution=2.80, R-factor=0.241)
structural superfamilyp53-like transcription factors;E set domains;
sequence familyRel homology domain RHD; IPT/TIG domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRYCEHKKR

Estimated binding specificities ?

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# IC=4.470 IC/col=0.894 n_of_columns=5 specificity:   
A |   0   0   0  68  27
C |  83   0   0   0  41
G |  13  96  96  28  13
T |   0   0   0   0  15
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updated Tue Dec 17 20:06:00 2024