interface graph thumbnail
legend  pdf

structure nameIRF TRANSCRIPTION FACTOR
(Interferon regulatory factor 4)
referenceCasarotto et al. 'Nucleic 49 2255 2021
sourceHomo sapiens
experimentX-ray (resolution=2.95, R-factor=0.186)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyInterferon regulatory factor transcription f;
multimeric complexes7jm4_GH 7o56_AB 7ogs_AB 7ogs_EF 7oot_AB 7rh2_GH 8jkl_CD 8jkl_GH 8jkq_DG 8jkq_FH 8jks_CD 8jks_GH
reference complex7oot_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTRCK

Estimated binding specificities ?

readout + contactlogo
# IC=4.747 IC/col=0.791 n_of_columns=6 specificity:   
A |   0   6   6   6   6  78
C |   0   6   6   6  78   6
G |  96   6   6   6   6   6
T |   0  78  78  78   6   6
scan!

home
updated Fri Sep 13 04:08:42 2024