interface graph thumbnail
legend  pdf

structure nameIRF TRANSCRIPTION FACTOR
(Interferon regulatory factor 4)
referenceCasarotto et al. 'Nucleic 49 2255 2021
sourceHomo sapiens
experimentX-ray (resolution=2.95, R-factor=0.186)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyInterferon regulatory factor transcription f;
multimeric complexes7jm4_GH 7o56_AB 7ogs_AB 7ogs_EF 7oot_AB 7rh2_GH
reference complex7oot_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTRCK

Estimated binding specificities ?

readout + contactlogo
# IC=5.044 IC/col=0.841 n_of_columns=6 specificity:   
A |   6   6  60  78  90   0
C |   6   0   6   6   6  96
G |   6  84  12   6   0   0
T |  78   6  18   6   0   0
scan!

home
updated Mon Dec 18 20:15:58 2023