7xyf_B : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF FFT3-NUCLEOSOME COMPLEX WITH FFT3 BOUND TO SHL+2 POSITION OF THE NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7xyf_B interface=24, lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg

  
  ------RC--                                             +7xyf_B    
                                                      +--1 
  --------KG                         +----------------2  +7nkx_f    
                                     !                ! 
  --LA--RG--                      +--3                +---7unc_a    
                                  !  ! 
  ------RT--                    +-4  +--------------------7kbd_C    
                                ! ! 
  IT--------                  +-5 +-----------------------3wkj_D    
                              ! ! 
  --LT--RC--                +-6 +------------------------3kwq_E    
                            ! ! 
  ------RG--              +-7 +-------------------------6iy2_A    
                          ! ! 
  ----KT----   L        +-8 +-------------------------7cvo_A    
                        ! ! 
  ------RG--          +-9 +--------------------------7ccr_A    
                      ! ! 
  --LT--RC--       +-10 +--------------------------4xzq_E    
                   !  !  
  ------RT--     -11  +---------------------------7zs9_e    
                   !  
  ------RG--       +---------------------------7y7i_E

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updated Sat Sep 14 07:25:21 2024