Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameNATIVE SUV420H1 BOUND TO 167-BP NUCLEOSOME
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes8jhg_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----RA------                                    +1zla_C    
                                   +--------------4 
  ----RG------                +----8              +8ox0_C    
                              !    ! 
  ----RA----RA          +----10    +--------------6a5l_g    
                        !     !  
  ----RG------       +-13     +-------------------5x0y_G    
                     !  !  
  ----RT------       !  !                         +7kbd_C    
                     !  +-------------------------1 
  ----RG------       !                            +8jla_C    
                     !  
  --------KG--       !                                      +--7nkx_f    
                     !                        +-------------5 
  LA--RG------       !                  +-----9             +--7unc_a    
                     !                  !     ! 
  LC--RT------       !                  !     +----------------8hr1_E    
                     !                  !  
  ----RC------       !                  !                  +---7xyf_B    
                     !              +--12            +-----6 
  LT--RC------       !              !   !            !     +---3kwq_E    
                   -19              !   !  +---------7 
  ----RG------       !              !   !  !         !         +7ccr_A    
                     !              !   !  !         +---------3 
  ----RT------       !           +-14   +-11                   +8grq_A    
                     !           !  !      !  
  IT----------       !           !  !      !                   +3wkj_D    
                     !           !  !      +-------------------2 
  ------RA----       !        +-15  !                          +6g0l_D    
                     !        !  !  !  
  ----RG------       !        !  !  +--------------------------6iy2_A    
                     !     +-16  !  
  --KT--------   L   !     !  !  +--------------------------7cvo_A    
                     !  +-17  !  
  LT--RC------       !  !  !  +--------------------------4xzq_E    
                     +-18  !  
  ----RT------          !  +--------------------------7zs9_e    
                        !  
  ----RG------          +---------------------------7y7i_E    
                   

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updated Mon Aug 4 01:27:04 2025