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legend  pdf

structure nameT95R MUTANT IRF4 DNA-BINDING DOMAIN BOUND TO AN DNA CONTAINING GAGA MOTIF
(Interferon regulatory factor 4)
referenceWang et al. Structure 31 1441 2023
sourceHomo sapiens
experimentX-ray (resolution=3.30, R-factor=0.238)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyInterferon regulatory factor transcription f;
multimeric complexes7jm4_GH 7o56_AB 7ogs_AB 7ogs_EF 7oot_AB 7rh2_GH 8jkl_CD 8jkl_GH 8jkq_DG 8jkq_FH 8jks_CD 8jks_GH
reference complex7oot_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHRRCAK

Estimated binding specificities ?

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# IC=4.434 IC/col=0.887 n_of_columns=5 specificity:   
A |   0   0  13  13   0
C |   0  96  16  54   0
G |   0   0  13  16  96
T |  96   0  54  13   0
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updated Fri Sep 13 12:08:53 2024