interface graph thumbnail
legend  pdf

structure nameINHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA
(C-ETS-1 PROTEIN)
referenceWolberger et al. J.Biol.Chem. 277 45529 2002
sourceMUS MUSCULUS
experimentX-ray (resolution=2.80, R-factor=0.259)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyEtsdomain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEKRRY

Estimated binding specificities ?

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# IC=3.646 IC/col=0.608 n_of_columns=6 specificity:   
A |   6   0   1  67  24  39
C |  78   0   2   9  24  19
G |   6  96  92   9  24  19
T |   6   0   1  11  24  19
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updated Mon Dec 16 18:10:26 2024