| structure name | CRYSTAL STRUCTURE OF ANDROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO A DIRECT REPEAT RESPONSE ELEMENT (Androgen receptor) |
| reference | Shaffer et al. Proc.Natl.Acad.Sci.USA 101 4758 2004 |
| source | Rattus norvegicus |
| experiment | X-ray (resolution=3.10, R-factor=?) |
| structural superfamily | Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | Zinc finger, C4 type two domains; |
| multimeric complexes | 1r4i_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ANDROGEN RECEPTOR | ||
| AGAACAGCAAGTGCT | PubMed | 1r4i_AB(1.52e-04) |
| GTCACAAAGAGTTCT | PubMed | 1r4i_AB(1.52e-04) |
Dendrogram of similar interfaces ?
matrix format--KGVT--RG-- +1r4i_A +--------------1 ECKA--RGRG-- L +-10 +4nqa_I ! ! EAKG--RTRTRT +-11 +--------------4umm_E ! ! --KGVT--RG-- L ! ! +5cbz_E ! +--------------5 ECKG--KGRG-- ! +3dzy_A +-12 EAKG--KTRG-- L ! ! +2han_A ! ! +--2 ECKG--RGRG-- L ! ! +-----7 +2nll_B ! ! ! ! ECKG--KGRG-- L ! +---------8 +--2ff0_A ! ! DGKG--RTRG-- L -13 ! +-3cbb_A ! +------6 ECKG--RGRG-- L ! +-3dzy_D ! ETKGAT--RG-- L ! +1lat_A ! +----------4 ECKG--KGRG-- L ! ! ! +1ynw_B +-------9 +-3 ECKG--RGRG-- L ! +5uan_B ! ECKG--KTRG-- L +-----------2nll_A |
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updated Fri Sep 13 15:57:39 2024