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legend  pdf

structure nameCRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER
(CAATENHANCER BINDING PROTEIN BETA)
referenceTahirov et al.
sourceHOMO SAPIENS
experimentX-ray (resolution=1.85, R-factor=0.231)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper; bZIP transcription factor;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNAVSR

Estimated binding specificities ?

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# IC=4.474 IC/col=0.895 n_of_columns=5 specificity:   
A |   0   0  48   0  12
C |   0   0  12  96  12
G |   0   0  12   0  60
T |  96  96  24   0  12
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updated Mon Dec 16 17:51:36 2024