interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A HIGH AFFINITY DNA FRAGMENT
(CAATENHANCER BINDING PROTEIN BETA)
referenceTahirov et al.
sourceHOMO SAPIENS
experimentX-ray (resolution=1.80, R-factor=0.232)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper; bZIP transcription factor;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNAVSR

Estimated binding specificities ?

readout + contactlogo
# IC=4.333 IC/col=0.867 n_of_columns=5 specificity:   
A |   0   0  54   0  29
C |   0   0  13  96  13
G |   0   0  13   0  41
T |  96  96  16   0  13
scan!

home
updated Mon Dec 16 17:51:41 2024