interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX3
referenceTahirov et al.
experimentX-ray (resolution=2.23, R-factor=0.245)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper; bZIP transcription factor;
multimeric complexes1gtw_AB 1gu4_AB 1gu5_AB 1h88_ABC 1h89_ABC 1h8a_ABC 1hjb_ABC 1hjb_DEF 1io4_ABC 2e42_AB 2e43_AB 6mg1_AB 6mg2_AB 6mg3_AB 7l4v_AB 7upz_AB
reference complex6mg1_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNNAVSR

Estimated binding specificities ?

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# IC=3.303 IC/col=0.661 n_of_columns=5 specificity:   
A |   6   2   8  88  14
C |   7  90  71   3  41
G |  77   1   9   3  20
T |   6   3   8   2  21
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updated Thu Sep 12 14:42:32 2024