interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX3
referenceTahirov et al.
experimentX-ray (resolution=2.23, R-factor=0.245)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper; bZIP transcription factor;
multimeric complexes1gtw_AB 1gu4_AB 1gu5_AB 1h88_ABC 1h89_ABC 1h8a_ABC 1hjb_ABC 1hjb_DEF 1io4_ABC 2e42_AB 2e43_AB 6mg1_AB 6mg2_AB 6mg3_AB 7l4v_AB 7upz_AB
reference complex6mg1_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNNAVSR

Estimated binding specificities ?

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# IC=3.327 IC/col=0.665 n_of_columns=5 specificity:   
A |  20   3   8   2   7
C |  20   4   9   1  77
G |  43   2  71  91   7
T |  13  87   8   2   5
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updated Mon Dec 18 05:08:57 2023