interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
referenceTahirov et al.
experimentX-ray (resolution=3.00, R-factor=0.244)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper; bZIP transcription factor;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNVSR

Estimated binding specificities ?

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# IC=3.968 IC/col=0.794 n_of_columns=5 specificity:   
A |   0   0   9   9   9
C |   0   0  11  67  67
G |   0   0   9  11   9
T |  96  96  67   9  11
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updated Mon Dec 16 17:53:53 2024