interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
(CAATENHANCER BINDING PROTEIN BETA)
referenceTahirov et al.
sourceHOMO SAPIENS
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper;
multimeric complexes1gtw_AB 1gu4_AB 1gu5_AB 1h88_ABC 1h89_ABC 1h8a_ABC 1hjb_ABC 1hjb_DEF 1io4_ABC 2e42_AB 2e43_AB 6mg1_AB 6mg2_AB 6mg3_AB 7l4v_AB 7upz_AB
reference complex6mg1_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNNAVSR

Estimated binding specificities ?

contactlogo
# IC=1.827 IC/col=0.304 n_of_columns=6 specificity:   
A |  12  12  63  70  60  19
C |  12  12  13   8  12  19
G |  60  60  10  10  12  20
T |  12  12  10   8  12  38
scan!

home
updated Thu Sep 12 14:45:13 2024