interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
(CAATENHANCER BINDING PROTEIN BETA)
referenceTahirov et al.
sourceHOMO SAPIENS
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNNAVSR

Estimated binding specificities ?

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# IC=1.879 IC/col=0.313 n_of_columns=6 specificity:   
A |  38  12   8  10  12  12
C |  19  12  10  10  60  60
G |  20  12   8  10  12  12
T |  19  60  70  66  12  12
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updated Mon Dec 16 17:56:29 2024