interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A NF-KB HETERODIMER BOUND TO THE IG/HIV-KB SITI
referenceChen-Park et al. J.Biol.Chem. 277 24694 2002
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyp53-like transcription factors;E set domains;
sequence familyRel homology domain RHD; IPT/TIG domain;
multimeric complexes1le5_AB 1le5_EF 1le9_AB 1le9_EF 1lei_AB 1ram_AB 1vkx_AB 2i9t_AB 2ram_AB 3gut_ABD 3gut_CF 3gut_EGH 5u01_ABCD 9bdu_AB 9bdv_AB 9bdw_AB 9bdx_AB
reference complex9bdw_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRYCEAR

Estimated binding specificities ?

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# IC=4.475 IC/col=0.895 n_of_columns=5 specificity:   
A |  13   0   0   0  13
C |  13   0  96  96  16
G |  13   0   0   0  13
T |  57  96   0   0  54
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updated Mon Dec 16 18:04:15 2024