interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE MUTANT D75N I-CREI IN COMPLEX WITH ITS WILD- TYPE TARGET IN ABSENCE OF METAL IONS AT THE ACTIVE SITE (THE FOUR CENTRAL BASES, 2NN REGION, ARE COMPOSED BY GTAC FROM 5' TO 3')
(DNA ENDONUCLEASE I-CREI)
referenceMarenchino et al. 'Nucleic 40 6936 2012
sourceCHLAMYDOMONAS REINHARDTII
experimentX-ray (resolution=3.10, R-factor=0.213)
structural superfamilyHoming endonucleases;
sequence familyLAGLIDADG endonuclease;
multimeric complexes1bp7_AB 1bp7_CD 1g9y_AB 1t9i_AB 1t9j_AB 1u0c_AB 1u0d_AB 2i3p_AB 2vbj_AB 2vbo_AB 3mxb_AB 3mxb_RS 4aad_AB 4aae_AB 4aaf_AB 4aag_AB 4aqu_AB 6fb8_AB
reference complex1t9i_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIQKNSYQQRRKT

Estimated binding specificities ?

readout + contactlogo
# IC=12.137 IC/col=1.011 n_of_columns=12 specificity:   
A |   0  96  96   7  76   3   0   0   0   3   0  76
C |  96   0   0   0  19  60   0   0  80  11  11   6
G |   0   0   0   1   0  30  96   0  13  82   5   7
T |   0   0   0  88   1   3   0  96   3   0  80   7
scan!

home
updated Mon Dec 16 22:45:00 2024