6fq8_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CLASS 3 : TRANSLOCATED NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	6fq5_ABCDEFGH 6fq6_ABCDEFGH 6fq8_ABCDEFGH
redundant complexes	6fq5 6fq6
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fq8_A interface=3,5, phRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirg

  
  RG--------                                  +8jh2_e    
                               +--------------2 
  RG--RT----           +-------5              +8grq_A    
                       !       ! 
  RGLCRT----         +-8       +--------------8hr1_E    
                     ! ! 
  ----RG----       +-9 +----------------------5x0y_G    
                   ! ! 
  ----RG----       ! +------------------------8jla_C    
                   !  
  ----RA----       !                +---------1zla_C    
                 -10         +------4 
  ------RA--       !         !      +---------6g0l_D    
                   !    +----6 
  ----RT----       !    !    !                +8u14_G    
                   !    !    +----------------1 
  ----RG----       +----7                     +8ox0_C    
                        ! 
  ----RG----            !                     +8txv_G    
                        +---------------------3 
  ----RA--RA                                  +6a5l_g

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updated Sun Aug 3 11:16:50 2025