6fq8_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CLASS 3 : TRANSLOCATED NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	4xzq_ABCDEFGH 4ys3_ABCDEFGH 4z66_ABCDEFGH 5mlu_ABCDEFGH 5wcu_ABCDEFGHU 5wcu_KLMNOPQRV 6fq5_ABCDEFGH 6fq6_ABCDEFGH 6fq8_ABCDEFGH 6ftx_ABCDEFGHW 6iy2_ABCDEFGHO 6iy3_ABCDEFGHO 6jm9_ABCDEFGH 6jma_ABCDEFGH 6y5d_ABCDEFGH 6y5d_KMNOPQRST 7k6p_ABCDEFGH 7k6q_ABCDEFGHK 7xcr_ABCDEFGH 7xct_ABCDEFGHL 8grq_ABCDEFGH 8hr1_ABCDEFGH 8u5h_IJKMOQRS 8x7k_ABCDEFGH
redundant complexes	7k6q_A 8grq_E 4xzq 4ys3 4z66 5mlu 5wcu 6fq5 6fq6 6ftx 6iy2 6iy3 6jm9 6jma 6y5d 7k6p 7xcr 7xct 8hr1 8u5h 8x7k
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6fq8_A interface=3,5, phRyRpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirg

  
  RG----RT--       +-----------------------------6px1_A    
                   ! 
  RG--------       !                            +8jh2_e    
                   !          +-----------------3 
  ------RC--     --9      +---5                 +7ux9_E    
                   !      !   ! 
  ------RA--       !  +---7   +------------------7e9c_F    
                   !  !   ! 
  ------RC--       !  !   +----------------------7yqk_C    
                   +--8 
  ------RT--          !                          +8u14_G    
                      !      +-------------------1 
  ------RG--          !      !                   +8upf_G    
                      +------6 
  ------RG--                 !                  +8txv_G    
                             +------------------4 
  ------RARA                                    ! +6a5l_g    
                                                +-2 
  --HGRTRG--                                      +8rbx_V

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updated Sat Jan 10 10:08:19 2026