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structure nameC-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA BOUND TO DNA WITH CONSENSUS RECOGNITION WITH GT MISMATCH
(CCAATenhancer-binding protein beta)
referenceHorton et al. 'Nucleic 49 5084 2021
sourceHomo sapiens
experimentX-ray (resolution=1.75, R-factor=0.200)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper; bZIP transcription factor;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRNAVSR

Estimated binding specificities ?

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# IC=7.653 IC/col=0.957 n_of_columns=8 specificity:   
A |   0   0   1  96  96  17   0  26
C |  96   0  26   0   0  26  96  43
G |   0  96   0   0   0  10   0   8
T |   0   0  69   0   0  43   0  19
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updated Tue Dec 17 09:48:09 2024