interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF C/EBPBETA BZIP DOMAIN BOUND TO A HIGH AFFINITY DNA
(CCAATenhancer-binding protein beta)
referenceChen et al. J.Biol.Chem. 300 105776 2024
sourceHomo sapiens
experimentX-ray (resolution=2.20, R-factor=0.239)
structural superfamilyLeucine zipper domain;
sequence familyBasic region leucine zipper; bZIP transcription factor;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNNAVSR

Estimated binding specificities ?

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# IC=4.860 IC/col=0.972 n_of_columns=5 specificity:   
A |  19   0   1  96  96
C |  39   0  19   0   0
G |  19  96   0   0   0
T |  19   0  76   0   0
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updated Tue Dec 17 18:24:11 2024