| structure name | MAT A1/ALPHA2/DNA TERNARY COMPLEX (PROTEIN MATING-TYPE PROTEIN A-1) |
| reference | Vershon et al. |
| source | SACCHAROMYCES CEREVISIAE |
| experiment | X-ray (resolution=2.50, R-factor=?) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| multimeric complexes | 1akh_AB 1le8_AB 1yrn_AB |
| redundant complexes | 1yrn |
| reference complex | 1le8_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RVINMR |
Estimated binding specificities ?
| readout + contact |  |
A | 12 0 96 24 84 12 96 C | 12 0 0 24 0 12 0 G | 12 96 0 24 12 12 0 T | 60 0 0 24 0 60 0scan! |
Dendrogram of similar interfaces ?
matrix format------------------------FTYAQTNAATRG L +--6ryd_F +-------------2 --------------------------NT--NAIARG L +------4 +--1b72_B ! ! --------------------------VAQTNA---- L ! +----------------5hod_A +-----5 --------------------RT----IAQCNA---- L ! ! +5jlw_D ! ! +--------------1 --------------------------IAQCNAYA-- L +-6 +--------3 +1nk2_P ! ! ! --------------------------IAKGNA---- L ! ! +--------------6m3d_C +-7 ! ----------------LG--LCRG------------ ! ! +-----------------------------4ew0_A +-8 ! --------------------------ICQTNA---- L ! ! +-----------------------------5edn_J +-9 ! ------LAHAKARA---------------------- ! ! +-----------------------------6dta_A +-10 ! ------------------------QTVAQTNA---- L ! ! +-----------------------------3a01_F +-11 ! --------------------------IAQTNAATRG L ! ! +-----------------------------5zfz_A +-12 ! ------------------TT------HTRTVG---- L ! ! +-----------------------------6ldm_A +-13 ! --------------RA--------KAITQTNAMC-- L ! ! +-----------------------------1ahd_P -14 ! --------------------------ITQCNAMC-- ! +-----------------------------2r5y_A ! FAWTQA------------------------------ L +-----------------------------6wq2_b |
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updated Thu Sep 12 14:32:07 2024