| structure name | A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER (PROTEIN TRANSCRIPTION FACTOR NF-KB P65) |
| reference | Chen et al. Nat.Struct.Biol. 5 67 1998 |
| source | Mus musculus |
| experiment | X-ray (resolution=2.40, R-factor=0.213) |
| structural superfamily | p53-like transcription factors;E set domains; |
| sequence family | Rel homology domain RHD; IPT/TIG domain; |
| multimeric complexes | 1le5_AB 1le5_EF 1le9_AB 1le9_EF 1lei_AB 1ram_AB 1vkx_AB 2i9t_AB 2ram_AB 3gut_ABD 3gut_CF 3gut_EGH 5u01_ABCD |
| redundant complexes | 1le5_A
 1le9_A
1ram_B
1vkx_A
5u01_A
1lei
2i9t
3gut
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix formatRGRG----EC----------RGPTKT-- +2ram_A +--------------1 RGRGYTCTECRT--------RT--KA-- L +----2 +2o61_A ! ! RGRGYTCTEC----------RT------ L +--3 +--------------1gji_A ! ! RGRGYTCCEC----------KT------ +-4 +-------------------2v2t_A ! ! RGRGYTCCEC----HG----KG------ L +-5 +----------------------1a3q_A ! ! RGRGYTCCEC----HTKT--KTPTKTRG L +-6 +------------------------1nfk_A ! ! RGRGYACCEC--SAHG----KG------ L +--7 +-------------------------7cli_B ! ! RGRGYA--EC----HG----KG------ L --8 +-------------------------7w7l_B ! ------------------RTVC------ L +----------------------------3wu1_A |
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updated Tue Dec 19 06:56:54 2023