Interface of input file ?
legend pdf
legend
3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.
Dendrogram of similar interfaces ?
matrix format| structure name | CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CORE PARTICLE UBIQUITYLATED AT HISTONE H2A LYSINE 15 IN COMPLEX WITH RNF168-UBCH5C (CLASS 1) |
| experiment | NMR |
| structural superfamily | Histone-fold; |
| sequence family | Core histone H2A/H2B/H3/H4; |
| multimeric complexes | 8u13_ABCDEFGH 8u14_ABCDEFGH 8upf_ABCDEFGH |
| redundant complexes | 8upf_C 8u14 |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
------RG------ +-----------------------------5x0y_G +-20 ------RG------ ! +-----------------------------8ox0_C ! ------RA------ ! +1zla_C ! +-------------4 ------RA----RA ! ! +6a5l_g ! +----------10 ------RT------ ! ! ! +5z23_C ! ! +--------------1 ------RG------ ! ! +8jla_C ! ! KG----RT------ ! ! +----------------------7kbd_C ! ! ! ------RC------ ! ! ! +---7xyf_B ! +-15 ! +-6 ----KT-------- L ! ! ! ! +-------7 +---7cvo_A ! ! ! +-13 ! ! --LC--RT------ ! ! ! ! ! +-------8 +-----8hr1_E -21 ! ! ! ! ! ! --IT---------- ! ! ! ! ! ! ! +3wkj_D ! ! ! ! ! ! +-------------2 --------RA---- ! ! ! ! +-12 +6g0l_D ! ! ! ! ! ------RG------ ! ! +-14 ! +7ccr_A ! +-16 ! ! +--------------3 ------RT------ ! ! ! ! +------9 +8grq_A ! ! ! ! ! ------RT------ ! ! ! ! +--------------7zs9_e ! ! ! ! ------RC------ ! ! ! ! +-------------------7on1_c ! +-17 ! +--11 ----------KG-- ! ! ! ! ! +---7nkx_f ! ! ! ! +---------------5 --LA--RG------ ! ! ! ! +---7unc_a ! +-18 ! ! --LT--RC------ ! ! ! ! +---------------------------3kwq_E ! ! ! ! ------RG------ +-19 ! +---------------------------6iy2_A ! ! --LT--RC------ ! +----------------------------4xzq_E ! ------RG------ +----------------------------7y7i_E |
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updated Mon Aug 4 02:20:03 2025