Interface of input file ?

interface graph
legend  pdf

footprint
legend

structure nameSTRUCTURE OF SNAPC CONTAINING POL II PRE-INITIATION COMPLEX BOUND TO U5 SNRNA PROMOTER (CC)
experimentNMR
structural superfamilyTATA-box binding protein-like;
sequence familyTranscription factor TFIID or TATAbinding;
multimeric complexes5iy6_AMPTV 5iy7_ABEMNPTV 5iy8_ABEMNPTV 5iy9_ABEMNPTV 5iya_AMPT 5iyb_ABEMNPT 5iyc_ABEMNPT 5iyd_ABEMNPT 6mzm_ABTW 6o9l_7AMNPT 6o9l_ES 7lbm_AMOPTW 7lbm_BEQ 7nvr_7AEMORU 7nvs_AMORU 7nvs_BE 7nvt_AMORU 7nvu_ABEMORU 7nvy_7AMORU 7nvy_BE 7nvz_7AMORU 7nw0_7ABEMORU 7zwd_AMORUbc 7zwd_BE 7zx7_AMORUbc 7zx7_BE 8gxq_ABCDEFGHPQs 8gxs_ABCDEFGHPQ 8iue_34BEPUVW 8iuh_1I 8iuh_OQ 8s51_ABEMORU 8s52_ABEMORU 8s5n_ABEMORU
reference complex5iy6_P
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNVFALFVTNVFPLFVT

Estimated binding specificities ?

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# IC=7.547 IC/col=0.943 n_of_columns=8 specificity:   
A |   4  96   1   0   4  56   0  74
C |   4   0   1   0   4  13  96   7
G |  81   0  93   0   7  14   0   7
T |   7   0   1  96  81  13   0   8
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updated Fri Jan 9 20:30:49 2026