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legend  pdf

structure nameSTRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA
(PROTEIN RETINOIC ACID RECEPTOR RXR-ALPHA)
referenceDevarakonda et al. J.Mol.Biol. 296 509 2000
sourceHomo sapiens
experimentX-ray (resolution=2.10, R-factor=0.234)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1by4_BC 1dsz_AB 1r0n_AB 1ynw_AB 2nll_AB 4cn2_CD 4cn3_AD 4cn3_BC 4cn5_AB 4cn7_AB 4cn7_EF 6fbq_AB 6fbr_AB 6xwg_CD 6xwh_CD
reference complex6fbq_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEKKR

Estimated binding specificities ?

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# IC=4.007 IC/col=0.801 n_of_columns=5 specificity:   
A |   9   0   9  11  96
C |   9   0  11  67   0
G |  69  96   9   9   0
T |   9   0  67   9   0
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updated Mon Dec 18 04:59:20 2023