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legend  pdf

structure nameSTRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA
(PROTEIN RETINOIC ACID RECEPTOR RXR-ALPHA)
referenceDevarakonda et al. J.Mol.Biol. 296 509 2000
sourceHomo sapiens
experimentX-ray (resolution=2.10, R-factor=0.234)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1by4_BC 1dsz_AB 1r0n_AB 1ynw_AB 2nll_AB 4cn2_CD 4cn3_AD 4cn3_BC 4cn5_AB 4cn7_AB 4cn7_EF 6fbq_AB 6fbr_AB 6xwg_CD 6xwh_CD 8hbm_AB 8hbm_EF 8j54_CD 8j54_EF
reference complex6fbq_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEKKR

Estimated binding specificities ?

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# IC=3.968 IC/col=0.794 n_of_columns=5 specificity:   
A |   0  11  67   0   9
C |   0   9   9  96  67
G |   0  67   9   0  11
T |  96   9  11   0   9
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updated Sat Aug 2 00:45:49 2025