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legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27BP NON CONSENSUS SEQUENCE DNA F6
(DNA-binding protein fis)
referenceJohnson et al. 'Genes 24 814 2010
sourceEscherichia coli
experimentX-ray (resolution=3.11, R-factor=0.240)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTR

Estimated binding specificities ?

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# IC=4.476 IC/col=0.746 n_of_columns=6 specificity:   
A |   0  54  24  21   0  96
C |   0   0  24  42   0   0
G |   0  21  24  21   0   0
T |  96  21  24  12  96   0
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updated Mon Dec 16 21:05:41 2024