interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F25 CONTAINING T2A3 SEQUENCE AT CENTER
(DNA-binding protein fis)
referenceJohnson et al. 'Genes 24 814 2010
sourceEscherichia coli
experimentX-ray (resolution=3.10, R-factor=0.245)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTR

Estimated binding specificities ?

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# IC=3.582 IC/col=0.597 n_of_columns=6 specificity:   
A |   7   0   7  24   7  73
C |   7   0  73  24  73   7
G |   9  96   9  24   9   7
T |  73   0   7  24   7   9
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updated Mon Dec 16 21:06:16 2024