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legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27 BP DNA F27 CONTAINING A C/G AT CENTER
(DNA-binding protein fis)
referenceJohnson et al. 'Genes 24 814 2010
sourceEscherichia coli
experimentX-ray (resolution=3.05, R-factor=0.223)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTK

Estimated binding specificities ?

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# IC=3.895 IC/col=0.649 n_of_columns=6 specificity:   
A |   0   8  24   8   8  96
C |   1   8  24   8  69   0
G |   8  72  24  72  11   0
T |  87   8  24   8   8   0
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updated Mon Dec 16 21:06:34 2024