interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN RAMP2 RESPONSE ELEMENT
(RETINOIC ACID RECEPTOR RXR-ALPHA)
referencePoussin-Courmontagne et al. Sci.Rep. 5 8216 2015
sourceHOMO SAPIENS
experimentX-ray (resolution=2.07, R-factor=0.167)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEKKRR

Estimated binding specificities ?

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# IC=4.434 IC/col=0.887 n_of_columns=5 specificity:   
A |  16   0  54   0   0
C |  13   0  13  96  96
G |  13  96  13   0   0
T |  54   0  16   0   0
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updated Mon Dec 16 22:57:08 2024