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structure nameCRYSTAL STRUCTURE OF THE HUMAN RETINOID X RECEPTOR DNA-BINDING DOMAIN BOUND TO THE HUMAN NR1D1 RESPONSE ELEMENT
(RETINOIC ACID RECEPTOR RXR-ALPHA)
referencePoussin-Courmontagne et al. Sci.Rep. 5 8216 2015
sourceHOMO SAPIENS
experimentX-ray (resolution=2.00, R-factor=0.171)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
sequence familyZinc finger, C4 type two domains;
multimeric complexes1by4_BC 1dsz_AB 1r0n_AB 1ynw_AB 2nll_AB 4cn2_CD 4cn3_AD 4cn3_BC 4cn5_AB 4cn7_AB 4cn7_EF 6fbq_AB 6fbr_AB 6xwg_CD 6xwh_CD
reference complex6fbq_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSEKKRR

Estimated binding specificities ?

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# IC=4.908 IC/col=0.982 n_of_columns=5 specificity:   
A |   0   0   0   0  39
C |   0   0  19  96  19
G |  96   0   0   0  19
T |   0  96  77   0  19
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updated Mon Dec 18 09:55:49 2023