interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27 BP SEQUENCE DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
(DNA-binding protein fis)
referenceHancock et al. 'Nucleic 41 6750 2013
sourceEscherichia coli
experimentX-ray (resolution=2.72, R-factor=0.221)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
multimeric complexes3iv5_AB 3jr9_AB 3jra_AB 3jrb_AB 3jrc_AB 3jrd_AB 3jre_AB 3jrf_AB 3jrg_AB 3jrh_AB 3jri_AB 4ihv_AB 4ihw_AB 4ihx_AB 4ihy_AB 5ds9_AB 5dtd_AB 5e3l_AB 5e3m_AB 5e3n_AB 5e3o_AB 6p0s_ABE 6p0t_ABE 6p0u_ABEF
reference complex5ds9_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTR

Estimated binding specificities ?

contactlogo
# IC=1.557 IC/col=0.259 n_of_columns=6 specificity:   
A |   8   8  14  24  20  13
C |   7   8  14  24  22  13
G |   7  70  16  24  20  57
T |  74  10  52  24  34  13
scan!

home
updated Thu Sep 12 19:28:01 2024