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legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27 BP SEQUENCE DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
(DNA-binding protein fis)
referenceHancock et al. 'Nucleic 41 6750 2013
sourceEscherichia coli
experimentX-ray (resolution=2.72, R-factor=0.221)
structural superfamilyHomeodomain-like;
sequence familyBacterial regulatory protein, Fis family;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureTNRTR

Estimated binding specificities ?

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# IC=1.557 IC/col=0.259 n_of_columns=6 specificity:   
A |   8   8  14  24  20  13
C |   7   8  14  24  22  13
G |   7  70  16  24  20  57
T |  74  10  52  24  34  13
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updated Mon Dec 16 23:34:02 2024